Imagine waking up to the aroma of freshly baked bagels, golden and warm, with a delightful crunch on the outside and a soft, chewy center that begs to be devoured. These High Protein Breakfast Bagels are not just any ordinary bagels; they are a deliciously satisfying way to kickstart your day, bursting with flavors that dance on your palate and textures that make every bite an experience. Whether you’re rushing to work or enjoying a lazy weekend brunch, these protein-packed wonders promise to keep you fueled and smiling all morning long.
I still remember the first time I experimented with making these bagels in my tiny kitchen, flour flying everywhere as I tried to perfect the recipe while juggling a toddler’s demands. The laughter and chaos made each batch even more special, and now they’ve become our family’s go-to breakfast for both busy weekdays and leisurely Sunday mornings. Packed with wholesome ingredients and boasting a flavor explosion that rivals your favorite café’s offerings, these High Protein Breakfast Bagels will not only satisfy your hunger but also elevate your breakfast game to new heights.
Why will High Protein Breakfast Bagels amaze you?
Packed with protein, these breakfast bagels will fuel your day and keep you satisfied until lunch.
Quick to prepare, they’re perfect for busy mornings or meal prep sessions.
Flavorful and versatile, customize them with your favorite toppings to match your mood.
Kid-approved, even picky eaters will love their deliciousness!
Get ready to enjoy a nutritious start that everyone at the table will rave about!
High Protein Breakfast Bagels Ingredients
For the Bagel Dough
- 2 cups whole wheat flour – Offers a hearty texture and is rich in fiber, making your bagels wholesome.
- 1 cup Greek yogurt (plain, unsweetened) – Provides creaminess and a protein boost; substitute with any plain yogurt if needed.
- 1 tablespoon baking powder – Essential for leavening, helping your bagels rise to a perfect fluffy consistency.
- 1 teaspoon salt – Enhances flavor and balances the sweetness of other ingredients; adjust to taste if necessary.
- 1 tablespoon honey (optional for sweetness) – Adds a subtle sweetness that complements the savory toppings beautifully.
For the Toppings
- 1 cup shredded cheese (cheddar or mozzarella) – Melts perfectly on top, adding richness and flavor to each bite of your High Protein Breakfast Bagels.
- 1 cup cooked and crumbled turkey bacon – Provides a deliciously smoky flavor while keeping it lean and protein-packed.
- 2 tablespoons chopped chives (for garnish) – Adds a fresh, vibrant touch that brightens up the dish visually and flavor-wise.
How to Make High Protein Breakfast Bagels

1. Preheat the oven to 375°F (190°C). This step ensures your bagels will bake evenly and achieve that lovely golden-brown crust we all crave.
2. Combine in a mixing bowl the 2 cups of whole wheat flour, 1 cup of plain Greek yogurt, 1 tbsp baking powder, 1 tsp salt, and 1 tbsp honey (if desired). Stir until a dough starts to form; it should be slightly sticky but manageable.
3. Knead the dough on a floured surface for about 5 minutes until it feels smooth and elastic. This process helps develop the gluten, giving your bagels that perfect chewy texture.
4. Divide the dough into 4 equal portions and shape each into a bagel, making a hole in the center. Don’t worry if they aren’t perfect; it’s all about the love you put into them!
5. Place the bagels on a baking sheet lined with parchment paper. This prevents sticking and makes cleanup a breeze – who doesn’t love an easy kitchen?
6. Bake in the preheated oven for 20 minutes or until they turn golden brown. Keep an eye on them; you’ll know they’re ready when they look irresistible!
7. Remove from the oven and let cool slightly. Give them a few moments before adding toppings so you don’t burn your fingers – trust me!
8. Top each bagel with 1 cup of shredded cheese (cheddar or mozzarella) and sprinkle on 1 cup of cooked and crumbled turkey bacon for that savory goodness.
9. Return to the oven for an additional 5 minutes until the cheese is melted and bubbly, filling your kitchen with mouthwatering aromas that are hard to resist.
10. Garnish with 2 tbsp of chopped chives before serving to add a pop of color and freshness to your delicious High Protein Breakfast Bagels.
Optional: Serve warm for maximum cheesy goodness!
Exact quantities are listed in the recipe card below.
Tips for the Best High Protein Breakfast Bagels
- Flour Choice: Use whole wheat flour for added nutrients. Ensure it’s fresh to avoid a dense texture in your bagels.
- Yogurt Quality: Opt for plain, unsweetened Greek yogurt. This enhances the protein content without unwanted sugars that can affect flavor.
- Dough Consistency: Knead the dough until smooth but avoid over-kneading. Overworking can lead to tough bagels instead of light and chewy ones.
- Shaping Tips: When forming bagels, make a larger hole than you think necessary. They will puff up during baking, which helps maintain the classic bagel shape.
- Topping Timing: Add cheese and turkey bacon before the final bake to ensure they meld perfectly with the bagel, creating a deliciously satisfying bite.
- Cooling Time: Allow bagels to cool slightly after baking. This helps them set properly and makes slicing much easier for your High Protein Breakfast Bagels.
Storage Tips for High Protein Breakfast Bagels
Room Temperature: Enjoy your High Protein Breakfast Bagels fresh for up to 1 day when stored in a paper bag or wrapped in a clean kitchen towel.
Fridge: Keep leftover bagels in an airtight container for up to 3 days. This will help maintain their moisture and flavor while preventing spoilage of the cheese and turkey bacon.
Freezer: For longer storage, freeze bagels individually wrapped in plastic wrap and placed in a freezer-safe bag for up to 2 months. This helps preserve their texture and taste.
Reheating: To enjoy your frozen High Protein Breakfast Bagels, simply thaw overnight in the fridge, then reheat in a toaster or oven until warm for about 5-10 minutes.
High Protein Breakfast Bagels
Customize these delightful bagels to suit your taste and dietary needs while enjoying their wholesome goodness.
- Gluten-Free: Replace whole wheat flour with gluten-free all-purpose flour for a lighter version.
This swap keeps the texture enjoyable while catering to gluten sensitivities. Your bagels will still be deliciously satisfying!
- Vegan: Use a plant-based yogurt and replace turkey bacon with sautéed mushrooms or tempeh.
This option brings a hearty, savory twist that everyone will love, offering rich flavors without any animal products.
- Spicy Kick: Add 1 teaspoon of red pepper flakes to the dough for a fiery flavor boost.
The heat from the flakes perfectly balances the richness of cheese and bacon, making every bite exciting.
- Herb-Infused: Mix in 1 tablespoon of dried Italian herbs or fresh chopped herbs into the dough for an aromatic touch.
The fragrant herbs elevate your bagels, adding depth and a burst of freshness that pairs beautifully with toppings.
- Cheesy Delight: Incorporate ½ cup of grated parmesan into the dough for an extra cheesy flavor in every bite.
This twist enhances both texture and taste, creating a mouthwatering experience that cheese lovers will adore!
- Nutty Crunch: Fold in ¼ cup of finely chopped walnuts or sunflower seeds into the dough for added texture.
These additions provide a delightful crunch that complements the softness of your bagels, making them even more satisfying.
- Sweet & Savory: Drizzle honey on top before baking instead of using it in the dough for a sweet contrast.
This variation creates an irresistible glaze that balances savory toppings with a hint of sweetness in each bite.
Make Ahead Options

If you’re looking for a meal prep winner, these High Protein Breakfast Bagels are your go-to! You can prepare the bagel dough ahead of time by mixing 2 cups of whole wheat flour, 1 cup of plain Greek yogurt, 1 tablespoon of baking powder, 1 teaspoon of salt, and 1 tablespoon of honey (if desired) in advance. Once your dough is ready, knead it and shape it into bagels; this step can be done up to 24 hours ahead. Store the shaped bagels in the fridge before baking them fresh. The toppings—1 cup of shredded cheese and 1 cup of cooked turkey bacon—can be prepped up to 3 days in advance; just keep them stored in airtight containers. When you’re ready to serve, bake the bagels as instructed and add the toppings for a deliciously melty finish. With these clever make-ahead tips, your mornings will be smoother, and you’ll savor every bite of your High Protein Breakfast Bagels!
High Protein Breakfast Bagels Recipe FAQs
What type of whole wheat flour should I use?
You can use any brand of whole wheat flour for these bagels, but for the best texture and flavor, look for stone-ground or finely milled varieties. If you prefer a lighter bagel, consider mixing half whole wheat flour with half all-purpose flour.
Can I substitute the Greek yogurt with another ingredient?
Absolutely! If you’re out of Greek yogurt, plain non-dairy yogurt or even cottage cheese can work as alternatives. Just keep in mind that the texture and protein content may vary slightly depending on what you choose.
How should I store leftover bagels?
To keep your bagels fresh, store them in an airtight container at room temperature for up to 2 days. For longer storage, wrap them tightly in plastic wrap and freeze them for up to 3 months. When you’re ready to enjoy, simply thaw and reheat in the oven for a few minutes.
What if my dough is too sticky?
If you find your dough is too sticky while kneading, don’t hesitate to sprinkle a little extra flour on your work surface and hands. Just be careful not to add too much, as this can make your bagels dense. Aim for a smooth texture that’s slightly tacky but manageable.
What are some good toppings besides cheese and turkey bacon?
Feel free to get creative with your toppings! Try adding sautéed spinach or mushrooms, diced tomatoes, or even a smear of avocado for extra nutrition. You can also experiment with different types of cheese like feta or pepper jack for added flavor.
How many servings does this recipe yield?
This recipe makes 4 hearty bagels, perfect for sharing with family or enjoying throughout the week. Each bagel is around 250 calories, making it a nutritious start to your day without compromising on taste!

High Protein Breakfast Bagels
Ingredients
Method
- Preheat the oven to 375°F (190°C).
- In a mixing bowl, combine whole wheat flour, Greek yogurt, baking powder, salt, and honey. Mix until a dough forms.
- Knead the dough on a floured surface for about 5 minutes until smooth.
- Divide the dough into 4 equal portions and shape each into a bagel, making a hole in the center.
- Place the bagels on a baking sheet lined with parchment paper.
- Bake in the preheated oven for 20 minutes or until golden brown.
- Remove from the oven and let cool slightly.
- Top each bagel with shredded cheese and crumbled turkey bacon.
- Return to the oven for an additional 5 minutes until the cheese is melted.
- Garnish with chopped chives before serving.




